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1) Robust transcriptome-wide discovery of RNA-binding protein binding sites with enhanced CLIP (eCLIP) (Nature Methods) Monday March 28th 2016
Eric L Van Nostrand, Gabriel A Pratt, Alexander A Shishkin, Chelsea Gelboin-Burkhart, Mark Y Fang, Balaji Sundararaman, Steven M Blue, Thai B Nguyen, Christine Surka, Keri Elkins, Rebecca Stanton, Frank Rigo, Mitchell Guttman, Gene W Yeo

2) Quantitative super-resolution imaging with qPAINT (Nature Methods) Monday March 28th 2016
Ralf Jungmann, Maier S Avenda, Mingjie Dai, Johannes B Woehrstein, Sarit S Agasti, Zachary Feiger, Avital Rodal, Peng Yin

3) Plug-and-play analysis of the human phosphoproteome by targeted high-resolution mass spectrometry (Nature Methods) Monday March 28th 2016
Robert T Lawrence, Brian C Searle, Ariadna Llovet, Judit Vill

4) Sparse PCA corrects for cell type heterogeneity in epigenome-wide association studies (Nature Methods) Monday March 28th 2016
Elior Rahmani, Noah Zaitlen, Yael Baran, Celeste Eng, Donglei Hu, Joshua Galanter, Sam Oh, Esteban G Burchard, Eleazar Eskin, James Zou, Eran Halperin

5) EMPIAR: a public archive for raw electron microscopy image data (Nature Methods) Monday March 21st 2016
Andrii Iudin, Paul K Korir, Jos, Gerard J Kleywegt, Ardan Patwardhan

6) Reprogramming eukaryotic translation with ligand-responsive synthetic RNA switches (Nature Methods) Monday March 21st 2016
Andrew V Anzalone, Annie J Lin, Sakellarios Zairis, Raul Rabadan, Virginia W Cornish

7) Strain-level microbial epidemiology and population genomics from shotgun metagenomics (Nature Methods) Monday March 21st 2016
Matthias Scholz, Doyle V Ward, Edoardo Pasolli, Thomas Tolio, Moreno Zolfo, Francesco Asnicar, Duy Tin Truong, Adrian Tett, Ardythe L Morrow, Nicola Segata

8) A saposin-lipoprotein nanoparticle system for membrane proteins (Nature Methods) Tuesday March 8th 2016
Jens Frauenfeld, Robin L, Jean-Paul Armache, Andreas F-P Sonnen, Fatma Guettou, Per Moberg, Lin Zhu, Caroline Jegersch, Ali Flayhan, John A G Briggs, Henrik Garoff, Christian L, Yifan Cheng, P

9) High-density three-dimensional localization microscopy across large volumes (Nature Methods) Tuesday March 8th 2016
Wesley R Legant, Lin Shao, Jonathan B Grimm, Timothy A Brown, Daniel E Milkie, Brian B Avants, Luke D Lavis, Eric Betzig

10) Tissue-specific regulatory circuits reveal variable modular perturbations across complex diseases (Nature Methods) Tuesday March 8th 2016
Daniel Marbach, David Lamparter, Gerald Quon, Manolis Kellis, Zolt, Sven Bergmann

11) T cell fate and clonality inference from single-cell transcriptomes (Nature Methods) Tuesday March 8th 2016
Michael J T Stubbington, Tapio L, Valentina Proserpio, Simon Clare, Anneliese O Speak, Gordon Dougan, Sarah A Teichmann

12) Analysis of computational footprinting methods for DNase sequencing experiments (Nature Methods) Monday February 29th 2016
Eduardo G Gusmao, Manuel Allhoff, Martin Zenke, Ivan G Costa

13) Inferring causal molecular networks: empirical assessment through a community-based effort (Nature Methods) Monday February 29th 2016
Steven M Hill, Laura M Heiser, Thomas Cokelaer, Michael Unger, Nicole K Nesser, Daniel E Carlin, Yang Zhang, Artem Sokolov, Evan O Paull, Chris K Wong, Kiley Graim, Adrian Bivol, Haizhou Wang, Fan Zhu, Bahman Afsari, Ludmila V Danilova, Alexander V Favorov, Wai Shing Lee, Dane Taylor, Chenyue W Hu, Byron L Long, David P Noren, Alexander J Bisberg, Gordon B Mills, Joe W Gray, Michael Kellen, Thea Norman, Stephen Friend, Amina A Qutub, Elana J Fertig, Yuanfang Guan, Mingzhou Song, Joshua M Stuart, Paul T Spellman, Heinz Koeppl, Gustavo Stolovitzky, Julio Saez-Rodriguez, Sach Mukherjee

14) One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy (Nature Methods) Monday February 29th 2016
Ido Yofe, Uri Weill, Matthias Meurer, Silvia Chuartzman, Einat Zalckvar, Omer Goldman, Shifra Ben-Dor, Conny Sch, Nils Wiedemann, Michael Knop, Anton Khmelinskii, Maya Schuldiner

15) SuReSim: simulating localization microscopy experiments from ground truth models (Nature Methods) Monday February 29th 2016
Varun Venkataramani, Frank Herrmannsd, Mike Heilemann, Thomas Kuner

16) High-resolution mass spectrometry of small molecules bound to membrane proteins (Nature Methods) Monday February 29th 2016
Joseph Gault, Joseph A C Donlan, Idlir Liko, Jonathan T S Hopper, Kallol Gupta, Nicholas G Housden, Weston B Struwe, Michael T Marty, Todd Mize, Cherine Bechara, Ya Zhu, Beili Wu, Colin Kleanthous, Mikhail Belov, Eugen Damoc, Alexander Makarov, Carol V Robinson

17) Apollo-NADP+: a spectrally tunable family of genetically encoded sensors for NADP+ (Nature Methods) Monday February 15th 2016
William D Cameron, Cindy V Bui, Ashley Hutchinson, Peter Loppnau, Susanne Gr, Jonathan V Rocheleau

18) Single-molecule imaging of non-equilibrium molecular ensembles on the millisecond timescale (Nature Methods) Monday February 15th 2016
Manuel F Juette, Daniel S Terry, Michael R Wasserman, Roger B Altman, Zhou Zhou, Hong Zhao, Scott C Blanchard

19) Simultaneous fast measurement of circuit dynamics at multiple sites across the mammalian brain (Nature Methods) Monday February 15th 2016
Christina K Kim, Samuel J Yang, Nandini Pichamoorthy, Noah P Young, Isaac Kauvar, Joshua H Jennings, Talia N Lerner, Andre Berndt, Soo Yeun Lee, Charu Ramakrishnan, Thomas J Davidson, Masatoshi Inoue, Haruhiko Bito, Karl Deisseroth

20) Sensory and optogenetically driven single-vessel fMRI (Nature Methods) Monday February 8th 2016
Xin Yu, Yi He, Maosen Wang, Hellmut Merkle, Stephen J Dodd, Afonso C Silva, Alan P Koretsky

21) epiGBS: reference-free reduced representation bisulfite sequencing (Nature Methods) Monday February 8th 2016
Thomas P van Gurp, Niels C A M Wagemaker, Bj, Philippine Vergeer, Joop N J Ouborg, Koen J F Verhoeven

22) Quantification of private information leakage from phenotype-genotype data: linking attacks (Nature Methods) Monday February 1st 2016
Arif Harmanci, Mark Gerstein

23) TruSPAdes: barcode assembly of TruSeq synthetic long reads (Nature Methods) Monday February 1st 2016
Anton Bankevich, Pavel A Pevzner

24) Highly multiplexed simultaneous detection of RNAs and proteins in single cells (Nature Methods) Tuesday January 26th 2016
Andreas P Frei, Felice-Alessio Bava, Eli R Zunder, Elena W Y Hsieh, Shih-Yu Chen, Garry P Nolan, Pier Federico Gherardini

25) A genetically targetable near-infrared photosensitizer (Nature Methods) Tuesday January 26th 2016
Jianjun He, Yi Wang, Maria A Missinato, Ezenwa Onuoha, Lydia A Perkins, Simon C Watkins, Claudette M St Croix, Michael Tsang, Marcel P Bruchez

26) Multi-target spectrally resolved fluorescence lifetime imaging microscopy (Nature Methods) Tuesday January 26th 2016
Thomas Nieh, Anna L, Ingo Gregor, Benedikt Kr, Hans-J, Matthias Patting, Felix Koberling, J, Markus Sauer

27) Characterizing transcriptional heterogeneity through pathway and gene set overdispersion analysis (Nature Methods) Monday January 18th 2016
Jean Fan, Neeraj Salathia, Rui Liu, Gwendolyn E Kaeser, Yun C Yung, Joseph L Herman, Fiona Kaper, Jian-Bing Fan, Kun Zhang, Jerold Chun, Peter V Kharchenko

28) Integrative genomic analysis by interoperation of bioinformatics tools in GenomeSpace (Nature Methods) Monday January 18th 2016
Kun Qu, Sara Garamszegi, Felix Wu, Helga Thorvaldsdottir, Ted Liefeld, Marco Ocana, Diego Borges-Rivera, Nathalie Pochet, James T Robinson, Barry Demchak, Tim Hull, Gil Ben-Artzi, Daniel Blankenberg, Galt P Barber, Brian T Lee, Robert M Kuhn, Anton Nekrutenko, Eran Segal, Trey Ideker, Michael Reich, Aviv Regev, Howard Y Chang, Jill P Mesirov

29) An informatic framework for decoding protein complexes by top-down mass spectrometry (Nature Methods) Monday January 18th 2016
Owen S Skinner, Pierre C Havugimana, Nicole A Haverland, Luca Fornelli, Bryan P Early, Joseph B Greer, Ryan T Fellers, Kenneth R Durbin, Luis H F Do Vale, Rafael D Melani, Henrique S Seckler, Micah T Nelp, Mikhail E Belov, Stevan R Horning, Alexander A Makarov, Richard D LeDuc, Vahe Bandarian, Philip D Compton, Neil L Kelleher

30) Genetic code expansion in stable cell lines enables encoded chromatin modification (Nature Methods) Monday January 11th 2016
Simon J Els, Russell J Ernst, Olivia S Walker, Jason W Chin

31) Parallel single-cell sequencing links transcriptional and epigenetic heterogeneity (Nature Methods) Monday January 11th 2016
Christof Angermueller, Stephen J Clark, Heather J Lee, Iain C Macaulay, Mabel J Teng, Tim Xiaoming Hu, Felix Krueger, S, Chris P Ponting, Thierry Voet, Gavin Kelsey, Oliver Stegle, Wolf Reik

32) Predictable tuning of protein expression in bacteria (Nature Methods) Monday January 11th 2016
Mads T Bonde, Margit Pedersen, Michael S Klausen, Sheila I Jensen, Tune Wulff, Scott Harrison, Alex T Nielsen, Markus J Herrg, Morten O A Sommer

33) Small airway-on-a-chip enables analysis of human lung inflammation and drug responses in vitro (Nature Methods) Monday December 21st 2015
Kambez H Benam, Remi Villenave, Carolina Lucchesi, Antonio Varone, Cedric Hubeau, Hyun-Hee Lee, Stephen E Alves, Michael Salmon, Thomas C Ferrante, James C Weaver, Anthony Bahinski, Geraldine A Hamilton, Donald E Ingber

34) Engineering an allosteric transcription factor to respond to new ligands (Nature Methods) Monday December 21st 2015
Noah D Taylor, Alexander S Garruss, Rocco Moretti, Sum Chan, Mark A Arbing, Duilio Cascio, Jameson K Rogers, Farren J Isaacs, Sriram Kosuri, David Baker, Stanley Fields, George M Church, Srivatsan Raman

35) Detecting actively translated open reading frames in ribosome profiling data (Nature Methods) Monday December 14th 2015
Lorenzo Calviello, Neelanjan Mukherjee, Emanuel Wyler, Henrik Zauber, Antje Hirsekorn, Matthias Selbach, Markus Landthaler, Benedikt Obermayer, Uwe Ohler

36) TRP channel mediated neuronal activation and ablation in freely behaving zebrafish (Nature Methods) Monday December 14th 2015
Shijia Chen, Cindy N Chiu, Kimberly L McArthur, Joseph R Fetcho, David A Prober

37) Nanoscale optomechanical actuators for controlling mechanotransduction in living cells (Nature Methods) Monday December 14th 2015
Zheng Liu, Yang Liu, Yuan Chang, Hamid Reza Seyf, Asegun Henry, Alexa L Mattheyses, Kevin Yehl, Yun Zhang, Zhuangqun Huang, Khalid Salaita

38) Inverted light-sheet microscope for imaging mouse pre-implantation development (Nature Methods) Monday December 14th 2015
Petr Strnad, Stefan Gunther, Judith Reichmann, Uros Krzic, Balint Balazs, Gustavo de Medeiros, Nils Norlin, Takashi Hiiragi, Lars Hufnagel, Jan Ellenberg

39) Three-dimensional force microscopy of cells in biopolymer networks (Nature Methods) Monday December 7th 2015
Julian Steinwachs, Claus Metzner, Kai Skodzek, Nadine Lang, Ingo Thievessen, Christoph Mark, Stefan M, Katerina E Aifantis, Ben Fabry

40) Cellular O-Glycome Reporter/Amplification to explore O-glycans of living cells (Nature Methods) Monday December 7th 2015
Matthew R Kudelka, Aristotelis Antonopoulos, Yingchun Wang, Duc M Duong, Xuezheng Song, Nicholas T Seyfried, Anne Dell, Stuart M Haslam, Richard D Cummings, Tongzhong Ju

41) Concentric-flow electrokinetic injector enables serial crystallography of ribosome and photosystem II (Nature Methods) Monday December 7th 2015
Raymond G Sierra, Cornelius Gati, Hartawan Laksmono, E Han Dao, Sheraz Gul, Franklin Fuller, Jan Kern, Ruchira Chatterjee, Mohamed Ibrahim, Aaron S Brewster, Iris D Young, Tara Michels-Clark, Andrew Aquila, Mengning Liang, Mark S Hunter, Jason E Koglin, S, Elia A Junco, Brandon Hayes, Michael J Bogan, Christina Y Hampton, Elisabetta V Puglisi, Nicholas K Sauter, Claudiu A Stan, Athina Zouni, Junko Yano, Vittal K Yachandra, S Michael Soltis, Joseph D Puglisi, Hasan DeMirci

42) Multiplexed analysis of chromosome conformation at vastly improved sensitivity (Nature Methods) Monday November 23rd 2015
James O J Davies, Jelena M Telenius, Simon J McGowan, Nigel A Roberts, Stephen Taylor, Douglas R Higgs, Jim R Hughes

43) NeuroGPS-Tree: automatic reconstruction of large-scale neuronal populations with dense neurites (Nature Methods) Monday November 23rd 2015
Tingwei Quan, Hang Zhou, Jing Li, Shiwei Li, Anan Li, Yuxin Li, Xiaohua Lv, Qingming Luo, Hui Gong, Shaoqun Zeng

44) MSPLIT-DIA: sensitive peptide identification for data-independent acquisition (Nature Methods) Monday November 16th 2015
Jian Wang, Monika Tucholska, James D R Knight, Jean-Philippe Lambert, Stephen Tate, Brett Larsen, Anne-Claude Gingras, Nuno Bandeira

45) Quantitative characterization of genetic parts and circuits for plant synthetic biology (Nature Methods) Monday November 16th 2015
Katherine A Schaumberg, Mauricio S Antunes, Tessema K Kassaw, Wenlong Xu, Christopher S Zalewski, June I Medford, Ashok Prasad

46) Fixed single-cell transcriptomic characterization of human radial glial diversity (Nature Methods) Monday November 16th 2015
Elliot R Thomsen, John K Mich, Zizhen Yao, Rebecca D Hodge, Adele M Doyle, Sumin Jang, Soraya I Shehata, Angelique M Nelson, Nadiya V Shapovalova, Boaz P Levi, Sharad Ramanathan

47) Multiscale photoacoustic tomography using reversibly switchable bacterial phytochrome as a near-infrared photochromic probe (Nature Methods) Monday November 16th 2015
Junjie Yao, Andrii A Kaberniuk, Lei Li, Daria M Shcherbakova, Ruiying Zhang, Lidai Wang, Guo Li, Vladislav V Verkhusha, Lihong V Wang

48) Protein-RNA networks revealed through covalent RNA marks (Nature Methods) Monday November 16th 2015
Christopher P Lapointe, Daniel Wilinski, Harriet A J Saunders, Marvin Wickens

49) Whole-animal functional and developmental imaging with isotropic spatial resolution (Nature Methods) Monday November 16th 2015
Raghav K Chhetri, Fernando Amat, Yinan Wan, Burkhard H, William C Lemon, Philipp J Keller

50) xTract: software for characterizing conformational changes of protein complexes by quantitative cross-linking mass spectrometry (Nature Methods) Monday November 16th 2015
Thomas Walzthoeni, Lukasz A Joachimiak, George Rosenberger, Hannes L R, Lars Malmstr, Alexander Leitner, Judith Frydman, Ruedi Aebersold

51) Tissue matrix arrays for high-throughput screening and systems analysis of cell function (Nature Methods) Monday November 16th 2015
Vince Z Beachley, Matthew T Wolf, Kaitlyn Sadtler, Srikanth S Manda, Heather Jacobs, Michael R Blatchley, Joel S Bader, Akhilesh Pandey, Drew Pardoll, Jennifer H Elisseeff

52) DNA-binding-domain fusions enhance the targeting range and precision of Cas9 (Nature Methods) Monday November 16th 2015
Mehmet Fatih Bolukbasi, Ankit Gupta, Sarah Oikemus, Alan G Derr, Manuel Garber, Michael H Brodsky, Lihua Julie Zhu, Scot A Wolfe

53) Continuously tunable nucleic acid hybridization probes (Nature Methods) Monday November 16th 2015
Lucia R Wu, Juexiao Sherry Wang, John Z Fang, Emily R Evans, Alessandro Pinto, Irena Pekker, Richard Boykin, Celine Ngouenet, Philippa J Webster, Joseph Beechem, David Yu Zhang

54) Parmbsc1: a refined force field for DNA simulations (Nature Methods) Monday November 16th 2015
Ivan Ivani, Pablo D Dans, Agnes Noy, Alberto P, Ignacio Faustino, Adam Hospital, J, Pau Andrio, Ramon Go, Alexandra Balaceanu, Guillem Portella, Federica Battistini, Josep Lluis Gelp, Carlos Gonz, Michele Vendruscolo, Charles A Laughton, Sarah A Harris, David A Case, Modesto Orozco

55) Efficient genotype compression and analysis of large genetic-variation data sets (Nature Methods) Monday November 16th 2015
Ryan M Layer, Neil Kindlon, Konrad J Karczewski, Aaron R Quinlan

56) Tissue cartography: compressing bio-image data by dimensional reduction (Nature Methods) Monday November 16th 2015
Idse Heemskerk, Sebastian J Streichan

57) Thermal proteome profiling monitors ligand interactions with cellular membrane proteins (Nature Methods) Monday November 16th 2015
Friedrich B M Reinhard, Dirk Eberhard, Thilo Werner, Holger Franken, Dorothee Childs, Carola Doce, Maria F, Wolfgang Huber, Marcus Bantscheff, Mikhail M Savitski, Gerard Drewes

58) Group-DIA: analyzing multiple data-independent acquisition mass spectrometry data files (Nature Methods) Monday October 12th 2015
Yuanyue Li, Chuan-Qi Zhong, Xiaozheng Xu, Shaowei Cai, Xiurong Wu, Yingying Zhang, Jinan Chen, Jianghong Shi, Shengcai Lin, Jiahuai Han

59) Transparent intracortical microprobe array for simultaneous spatiotemporal optical stimulation and multichannel electrical recording (Nature Methods) Monday October 12th 2015
Joonhee Lee, Ilker Ozden, Yoon-Kyu Song, Arto V Nurmikko

60) Bayesian cluster identification in single-molecule localization microscopy data (Nature Methods) Monday October 12th 2015
Patrick Rubin-Delanchy, Garth L Burn, Juliette Griffi, David J Williamson, Nicholas A Heard, Andrew P Cope, Dylan M Owen

61) Noncontact three-dimensional mapping of intracellular hydromechanical properties by Brillouin microscopy (Nature Methods) Monday October 12th 2015
Giuliano Scarcelli, William J Polacheck, Hadi T Nia, Kripa Patel, Alan J Grodzinsky, Roger D Kamm, Seok Hyun Yun

62) A strategy for dissecting the architectures of native macromolecular assemblies (Nature Methods) Monday October 12th 2015
Yi Shi, Riccardo Pellarin, Peter C Fridy, Javier Fernandez-Martinez, Mary K Thompson, Yinyin Li, Qing Jun Wang, Andrej Sali, Michael P Rout, Brian T Chait

63) Single Molecule Cluster Analysis dissects splicing pathway conformational dynamics (Nature Methods) Monday September 28th 2015
Mario R Blanco, Joshua S Martin, Matthew L Kahlscheuer, Ramya Krishnan, John Abelson, Alain Laederach, Nils G Walter

64) Proteome-wide profiling of protein assemblies by cross-linking mass spectrometry (Nature Methods) Monday September 28th 2015
Fan Liu, Dirk T S Rijkers, Harm Post, Albert J R Heck

65) Comparing the performance of biomedical clustering methods (Nature Methods) Monday September 21st 2015
Christian Wiwie, Jan Baumbach, Richard R

66) Whole-brain activity mapping onto a zebrafish brain atlas (Nature Methods) Monday September 21st 2015
Owen Randlett, Caroline L Wee, Eva A Naumann, Onyeka Nnaemeka, David Schoppik, James E Fitzgerald, Ruben Portugues, Alix M B Lacoste, Clemens Riegler, Florian Engert, Alexander F Schier

67) DNA sense-and-respond protein modules for mammalian cells (Nature Methods) Monday September 21st 2015
Shimyn Slomovic, James J Collins

68) Real-time metabolome profiling of the metabolic switch between starvation and growth (Nature Methods) Monday September 21st 2015
Hannes Link, Tobias Fuhrer, Luca Gerosa, Nicola Zamboni, Uwe Sauer

69) Proteome-wide drug and metabolite interaction mapping by thermal-stability profiling (Nature Methods) Monday September 21st 2015
Kilian V M Huber, Karin M Olek, Andr, Chris Soon Heng Tan, Keiryn L Bennett, Jacques Colinge, Giulio Superti-Furga

70) WASP: allele-specific software for robust molecular quantitative trait locus discovery (Nature Methods) Monday September 21st 2015
Bryce van de Geijn, Graham McVicker, Yoav Gilad, Jonathan K Pritchard

71) SR-Tesseler: a method to segment and quantify localization-based super-resolution microscopy data (Nature Methods) Monday September 7th 2015
Florian Levet, Eric Hosy, Adel Kechkar, Corey Butler, Anne Beghin, Daniel Choquet, Jean-Baptiste Sibarita

72) Interactive analysis and assessment of single-cell copy-number variations (Nature Methods) Monday September 7th 2015
Tyler Garvin, Robert Aboukhalil, Jude Kendall, Timour Baslan, Gurinder S Atwal, James Hicks, Michael Wigler, Michael C Schatz

73) Cas9 gRNA engineering for genome editing, activation and repression (Nature Methods) Monday September 7th 2015
Samira Kiani, Alejandro Chavez, Marcelle Tuttle, Richard N Hall, Raj Chari, Dmitry Ter-Ovanesyan, Jason Qian, Benjamin W Pruitt, Jacob Beal, Suhani Vora, Joanna Buchthal, Emma J K Kowal, Mohammad R Ebrahimkhani, James J Collins, Ron Weiss, George Church

74) Bisulfite-free, base-resolution analysis of 5-formylcytosine at the genome scale (Nature Methods) Monday September 7th 2015
Bo Xia, Dali Han, Xingyu Lu, Zhaozhu Sun, Ankun Zhou, Qiangzong Yin, Hu Zeng, Menghao Liu, Xiang Jiang, Wei Xie, Chuan He, Chengqi Yi

75) CRISPRscan: designing highly efficient sgRNAs for CRISPR-Cas9 targeting in vivo (Nature Methods) Monday August 31st 2015
Miguel A Moreno-Mateos, Charles E Vejnar, Jean-Denis Beaudoin, Juan P Fernandez, Emily K Mis, Mustafa K Khokha, Antonio J Giraldez

76) Programmed synthesis of three-dimensional tissues (Nature Methods) Monday August 31st 2015
Michael E Todhunter, Noel Y Jee, Alex J Hughes, Maxwell C Coyle, Alec Cerchiari, Justin Farlow, James C Garbe, Mark A LaBarge, Tejal A Desai, Zev J Gartner

77) Inntags: small self-structured epitopes for innocuous protein tagging (Nature Methods) Monday August 31st 2015
Maya V Georgieva, Galal Yahya, Laia Cod, Ra, Laura Teixid, Jos, Ricardo Jara, M, Antoni Iborra, Josep Llu, Carme Gallego, Modesto Orozco, Mart

78) Wirelessly powered, fully internal optogenetics for brain, spinal and peripheral circuits in mice (Nature Methods) Monday August 24th 2015
Kate L Montgomery, Alexander J Yeh, John S Ho, Vivien Tsao, Shrivats Mohan Iyer, Logan Grosenick, Emily A Ferenczi, Yuji Tanabe, Karl Deisseroth, Scott L Delp, Ada S Y Poon

79) High-throughput cellular RNA device engineering (Nature Methods) Monday August 24th 2015
Brent Townshend, Andrew B Kennedy, Joy S Xiang, Christina D Smolke

80) Oscope identifies oscillatory genes in unsynchronized single-cell RNA-seq experiments (Nature Methods) Monday August 24th 2015
Ning Leng, Li-Fang Chu, Chris Barry, Yuan Li, Jeea Choi, Xiaomao Li, Peng Jiang, Ron M Stewart, James A Thomson, Christina Kendziorski

81) Predicting effects of noncoding variants with deep learning (Nature Methods) Monday August 24th 2015
Jian Zhou, Olga G Troyanskaya

82) EMRinger: side chain (Nature Methods) Monday August 24th 2015
Benjamin A Barad, Nathaniel Echols, Ray Yu-Ruei Wang, Yifan Cheng, Frank DiMaio, Paul D Adams, James S Fraser

83) ChIPmentation: fast, robust, low-input ChIP-seq for histones and transcription factors (Nature Methods) Monday August 24th 2015
Christian Schmidl, Andr, Nathan C Sheffield, Christoph Bock

84) Ultrahigh-throughput single-molecule spectroscopy and spectrally resolved super-resolution microscopy (Nature Methods) Monday August 24th 2015
Zhengyang Zhang, Samuel J Kenny, Margaret Hauser, Wan Li, Ke Xu

85) SpeedSeq: ultra-fast personal genome analysis and interpretation (Nature Methods) Monday August 24th 2015
Colby Chiang, Ryan M Layer, Gregory G Faust, Michael R Lindberg, David B Rose, Erik P Garrison, Gabor T Marth, Aaron R Quinlan, Ira M Hall

86) Continuous directed evolution of DNA-binding proteins to improve TALEN specificity (Nature Methods) Monday August 24th 2015
Basil P Hubbard, Ahmed H Badran, John A Zuris, John P Guilinger, Kevin M Davis, Liwei Chen, Shengdar Q Tsai, Jeffry D Sander, J Keith Joung, David R Liu

87) ProteoPlex: stability optimization of macromolecular complexes by sparse-matrix screening of chemical space (Nature Methods) Monday August 3rd 2015
Ashwin Chari, David Haselbach, Jan-Martin Kirves, Juergen Ohmer, Elham Paknia, Niels Fischer, Oleg Ganichkin, Vanessa M, Jeremiah J Frye, Georg Petzold, Marc Jarvis, Michael Tietzel, Clemens Grimm, Jan-Michael Peters, Brenda A Schulman, Kai Tittmann, J, Utz Fischer, Holger Stark

88) ARM-seq: AlkB-facilitated RNA methylation sequencing reveals a complex landscape of modified tRNA fragments (Nature Methods) Monday August 3rd 2015
Aaron E Cozen, Erin Quartley, Andrew D Holmes, Eva Hrabeta-Robinson, Eric M Phizicky, Todd M Lowe

89) Automated, high-throughput derivation, characterization and differentiation of induced pluripotent stem cells (Nature Methods) Monday August 3rd 2015
Daniel Paull, Ana Sevilla, Hongyan Zhou, Aana Kim Hahn, Hesed Kim, Christopher Napolitano, Alexander Tsankov, Linshan Shang, Katie Krumholz, Premlatha Jagadeesan, Chris M Woodard, Bruce Sun, Thierry Vilboux, Matthew Zimmer, Eliana Forero, Dorota N Moroziewicz, Hector Martinez, May Christine V Malicdan, Keren A Weiss, Lauren B Vensand, Carmen R Dusenberry, Hannah Polus, Karla Therese L Sy, David J Kahler, William A Gahl, Susan L Solomon, Stephen Chang, Alexander Meissner, Kevin Eggan, Scott A Noggle

90) Mutational interference mapping experiment (MIME) for studying RNA structure and function (Nature Methods) Monday August 3rd 2015
Redmond P Smyth, Laurence Despons, Gong Huili, Serena Bernacchi, Marcel Hijnen, Johnson Mak, Fabrice Jossinet, Li Weixi, Jean-Christophe Paillart, Max von Kleist, Roland Marquet

91) EEG and functional ultrasound imaging in mobile rats (Nature Methods) Monday August 3rd 2015
Lim-Anna Sieu, Antoine Bergel, Elodie Tiran, Thomas Deffieux, Mathieu Pernot, Jean-Luc Gennisson, Micka, Ivan Cohen

92) Real-time imaging of brain activity in freely moving rats using functional ultrasound (Nature Methods) Monday July 27th 2015
Alan Urban, Clara Dussaux, Guillaume Martel, Cl, Emilie Mace, Gabriel Montaldo

93) Imaging G protein (Nature Methods) Monday July 27th 2015
David Alsteens, Moritz Pfreundschuh, Cheng Zhang, Patrizia M Spoerri, Shaun R Coughlin, Brian K Kobilka, Daniel J M

94) Photoactivatable genetically encoded calcium indicators for targeted neuronal imaging (Nature Methods) Monday July 27th 2015
Shai Berlin, Elizabeth C Carroll, Zachary L Newman, Hitomi O Okada, Carson M Quinn, Benjamin Kallman, Nathan C Rockwell, Shelley S Martin, J Clark Lagarias, Ehud Y Isacoff

95) A microfluidic device for epigenomic profiling using 100 cells (Nature Methods) Monday July 27th 2015
Zhenning Cao, Changya Chen, Bing He, Kai Tan, Chang Lu

96) Ultrafast, temporally stochastic STED nanoscopy of millisecond dynamics (Nature Methods) Monday July 27th 2015
Jale Schneider, Jasmin Zahn, Marta Maglione, Stephan J Sigrist, Jonas Marquard, Jakub Chojnacki, Hans-Georg Kr, Steffen J Sahl, Johann Engelhardt, Stefan W Hell

97) Efficient and quantitative high-throughput tRNA sequencing (Nature Methods) Monday July 27th 2015
Guanqun Zheng, Yidan Qin, Wesley C Clark, Qing Dai, Chengqi Yi, Chuan He, Alan M Lambowitz, Tao Pan

98) Inferring transient particle transport dynamics in live cells (Nature Methods) Monday July 27th 2015
Nilah Monnier, Zachary Barry, Hye Yoon Park, Kuan-Chung Su, Zachary Katz, Brian P English, Arkajit Dey, Keyao Pan, Iain M Cheeseman, Robert H Singer, Mark Bathe

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Mitch Andre Garcia's Chem Feeds 2008-present

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